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Company Name
Logomix Co., Ltd.
Job Type
Actively recruiting: Manager or Scientist in Bioinformatics
Work Detail
We create various large-scale genome-modified cells in collaborative research with major partner companies and in our own research. Next-generation sequencing (NGS) analysis is a crucial technology for verifying the accuracy of genome editing technology and analyzing cell phenotypes. You will be responsible for bioinformatics work, primarily focusing on the various NGS analyses we perform. ■Expected Job Responsibilities ・Quality control of genome-edited cells using whole genome sequencing analysis (analysis of fastq.gz read data) ・RNA-seq analysis/pathway analysis/scRNA-seq analysis/ATAC-seq analysis/Perturb-seq analysis targeting human cells ・Optimization of genome design using machine learning, deep learning, and large-scale language models ・Construction and fine-tuning of transformer-based bio-based models ・Utilization and operation of AWS cloud servers ・Utilization of lab automation (automated cell culture equipment)
Ideal Profile
Required Skills: • Hands-on experience using AI/AI-agentic tools for coding and software development. • Proven experience in managing human-centric bioinformatics research projects, from experimental design to final analysis. • Deep expertise in analyzing human biological data, particularly with Whole Genome Sequencing (WGS) and RNA-seq datasets. • High proficiency in a command-line environment (e.g., Linux, Bash). Programming Expertise: • Mandatory: Advanced programming skills in Python or R. • Welcomed: Experience with Shell Scripting, C++, Rust, JavaScript/TypeScript, or SQL (MySQL/PostgreSQL). • Practical experience in coding and software development utilizing AI/AI agent tools. • Experience in consistently managing bioinformatics research projects targeting human cells and samples, from experimental design to final analysis. • Advanced experience in analyzing raw human data, particularly single-cell RNA-seq and whole-genome sequencing (WGS). • High proficiency in command-line environments such as Linux and Bash. • Programming skills: Required: Advanced programming skills in either Python or R Preferred: Experience developing with shell scripts, C++, Rust, JavaScript/TypeScript, and SQL (MySQL/PostgreSQL) Preferred Skills: • Experience in data manipulation and bioinformatics analysis on AWS. • Practical experience as a system/infrastructure engineer (maintenance of AWS cloud servers or on-premise servers, etc.). • Experience in machine learning, deep learning, LLM development, or MLOps. • TOEIC score of 700 or higher. • A minimum of 3 years of relevant work experience. • Experience in data manipulation and bioinformatics analysis on AWS. • Practical experience as a system/infrastructure engineer. (Maintenance of AWS cloud servers and on-premise servers, etc.) - Experience in machine learning/deep learning/LLM development/MLOps - English proficiency with a TOEIC score of 700 or higher - Minimum three years of relevant work experience Desired Candidate Profile - Someone who will join us in creating next-generation cell therapy development - Someone who can work collaboratively in a team - Someone who can report/communicate/consult about failures and setbacks
Work Location
4259-3 Nagatsuta-cho, Midori-ku, Yokohama City, Kanagawa Prefecture Science Tokyo Yokohama Venture Plaza (Partial remote work available)
Phd. Stating Salary
Annual salary system Salary: Negotiable (includes fixed overtime pay for 41 hours)
Selection Flow
[Selection Process] First Interview (Web) Second Interview (Web) *Researcher positions only. An 8-minute research presentation is required. Third Interview (In-person) *Depending on the position, a discussion or dinner with employees may be planned. Reference Check Job Offer